Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Upk2P38575 Gm23105-201ENSMUST00000083719 134 ntBASIC9.86□□□□□ -0.83
Upk2P38575 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.86□□□□□ -0.83
Upk2P38575 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Upk2P38575 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Upk2P38575 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Upk2P38575 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
Upk2P38575 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.86□□□□□ -0.83
Upk2P38575 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Upk2P38575 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Upk2P38575 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Upk2P38575 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Upk2P38575 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Upk2P38575 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Upk2P38575 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Upk2P38575 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Upk2P38575 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Upk2P38575 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Upk2P38575 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Upk2P38575 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Upk2P38575 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
Upk2P38575 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9.85□□□□□ -0.83
Upk2P38575 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.85□□□□□ -0.83
Upk2P38575 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.85□□□□□ -0.83
Upk2P38575 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.85□□□□□ -0.83
Upk2P38575 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Mir7051-201ENSMUST00000184167 73 ntBASIC9.85□□□□□ -0.83
Upk2P38575 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC9.85□□□□□ -0.83
Upk2P38575 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Upk2P38575 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.85□□□□□ -0.83
Upk2P38575 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.85□□□□□ -0.83
Upk2P38575 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Upk2P38575 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.85□□□□□ -0.83
Upk2P38575 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Upk2P38575 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Upk2P38575 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Upk2P38575 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Upk2P38575 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
Upk2P38575 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Upk2P38575 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Upk2P38575 Gm11949-201ENSMUST00000117640 372 ntBASIC9.84□□□□□ -0.83
Upk2P38575 Gm12856-201ENSMUST00000119471 1293 ntBASIC9.84□□□□□ -0.83
Upk2P38575 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC9.84□□□□□ -0.83
Upk2P38575 Gm15432-201ENSMUST00000121106 195 ntBASIC9.84□□□□□ -0.83
Upk2P38575 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC9.84□□□□□ -0.83
Upk2P38575 Gm10051-201ENSMUST00000145209 414 ntBASIC9.84□□□□□ -0.83
Upk2P38575 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC9.84□□□□□ -0.83
Upk2P38575 Mir8115-201ENSMUST00000184992 119 ntBASIC9.84□□□□□ -0.83
Upk2P38575 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC9.84□□□□□ -0.83
Upk2P38575 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.84□□□□□ -0.83
Upk2P38575 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms