Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Usp4P35123 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp4P35123 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp4P35123 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Usp4P35123 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp4P35123 Gm15711-201ENSMUST00000118889 535 ntBASIC11.82□□□□□ -0.52
Usp4P35123 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.82□□□□□ -0.52
Usp4P35123 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Usp4P35123 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.82□□□□□ -0.52
Usp4P35123 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Usp4P35123 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.82□□□□□ -0.52
Usp4P35123 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.82□□□□□ -0.52
Usp4P35123 Gm45118-201ENSMUST00000208928 825 ntBASIC11.82□□□□□ -0.52
Usp4P35123 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp4P35123 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp4P35123 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp4P35123 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Usp4P35123 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Usp4P35123 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Usp4P35123 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Usp4P35123 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Usp4P35123 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.82□□□□□ -0.52
Usp4P35123 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Usp4P35123 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Usp4P35123 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Gm23949-201ENSMUST00000104027 127 ntBASIC11.81□□□□□ -0.52
Usp4P35123 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.81□□□□□ -0.52
Usp4P35123 Gm12380-201ENSMUST00000119012 544 ntBASIC11.81□□□□□ -0.52
Usp4P35123 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.81□□□□□ -0.52
Usp4P35123 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.81□□□□□ -0.52
Usp4P35123 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.81□□□□□ -0.52
Usp4P35123 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.81□□□□□ -0.52
Usp4P35123 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.81□□□□□ -0.52
Usp4P35123 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.81□□□□□ -0.52
Usp4P35123 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.81□□□□□ -0.52
Usp4P35123 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.81□□□□□ -0.52
Usp4P35123 Gm44008-201ENSMUST00000204345 412 ntBASIC11.81□□□□□ -0.52
Usp4P35123 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.81□□□□□ -0.52
Usp4P35123 Gm5705-201ENSMUST00000066241 711 ntBASIC11.81□□□□□ -0.52
Usp4P35123 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Usp4P35123 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.81□□□□□ -0.52
Usp4P35123 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Usp4P35123 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.81□□□□□ -0.52
Usp4P35123 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Usp4P35123 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Usp4P35123 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Usp4P35123 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Usp4P35123 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp4P35123 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Usp4P35123 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.8□□□□□ -0.52
Usp4P35123 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp4P35123 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Usp4P35123 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp4P35123 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp4P35123 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Usp4P35123 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Usp4P35123 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Usp4P35123 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Usp4P35123 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Usp4P35123 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp4P35123 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Usp4P35123 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Usp4P35123 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp4P35123 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Usp4P35123 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Usp4P35123 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp4P35123 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Usp4P35123 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Usp4P35123 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.8□□□□□ -0.52
Usp4P35123 Gm13408-201ENSMUST00000119822 798 ntBASIC11.8□□□□□ -0.52
Usp4P35123 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.8□□□□□ -0.52
Usp4P35123 Gm11450-201ENSMUST00000121144 333 ntBASIC11.8□□□□□ -0.52
Usp4P35123 Gm13935-201ENSMUST00000121859 798 ntBASIC11.8□□□□□ -0.52
Usp4P35123 Gm5616-201ENSMUST00000165252 384 ntBASIC11.8□□□□□ -0.52
Usp4P35123 Gm8741-201ENSMUST00000174736 384 ntBASIC11.8□□□□□ -0.52
Usp4P35123 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.8□□□□□ -0.52
Usp4P35123 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.8□□□□□ -0.52
Usp4P35123 Gm37597-201ENSMUST00000191853 382 ntBASIC11.8□□□□□ -0.52
Usp4P35123 Gm37835-201ENSMUST00000193305 361 ntBASIC11.8□□□□□ -0.52
Usp4P35123 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.8□□□□□ -0.52
Usp4P35123 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.8□□□□□ -0.52
Usp4P35123 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Usp4P35123 AC073947.1-201ENSMUST00000216991 649 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms