Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.62□□□□□ -0.71
Clk1P22518 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Clk1P22518 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.61□□□□□ -0.71
Clk1P22518 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.61□□□□□ -0.71
Clk1P22518 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.61□□□□□ -0.71
Clk1P22518 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Clk1P22518 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.61□□□□□ -0.71
Clk1P22518 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Clk1P22518 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Clk1P22518 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Clk1P22518 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.61□□□□□ -0.71
Clk1P22518 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Clk1P22518 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.61□□□□□ -0.71
Clk1P22518 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.61□□□□□ -0.71
Clk1P22518 Gm18734-201ENSMUST00000172937 808 ntBASIC10.61□□□□□ -0.71
Clk1P22518 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Clk1P22518 Gm28686-201ENSMUST00000187404 609 ntBASIC10.61□□□□□ -0.71
Clk1P22518 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.61□□□□□ -0.71
Clk1P22518 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.61□□□□□ -0.71
Clk1P22518 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.61□□□□□ -0.71
Clk1P22518 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.61□□□□□ -0.71
Clk1P22518 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Clk1P22518 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Clk1P22518 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.61□□□□□ -0.71
Clk1P22518 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Tdp1-207ENSMUST00000153627 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Txk-206ENSMUST00000198464 2271 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 AC132467.2-201ENSMUST00000226306 2253 ntBASIC10.61□□□□□ -0.71
Clk1P22518 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Clk1P22518 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.61□□□□□ -0.71
Clk1P22518 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Clk1P22518 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.61□□□□□ -0.71
Clk1P22518 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Clk1P22518 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.6□□□□□ -0.71
Clk1P22518 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Gm44067-201ENSMUST00000203350 2971 ntTSL 5 BASIC10.6□□□□□ -0.71
Clk1P22518 AC165148.1-201ENSMUST00000224795 2372 ntBASIC10.6□□□□□ -0.71
Clk1P22518 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Clk1P22518 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Clk1P22518 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.6□□□□□ -0.71
Clk1P22518 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.6□□□□□ -0.71
Clk1P22518 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Gm4909-201ENSMUST00000118749 794 ntBASIC10.6□□□□□ -0.71
Clk1P22518 Gm11783-201ENSMUST00000119549 885 ntBASIC10.6□□□□□ -0.71
Clk1P22518 Gm14208-201ENSMUST00000119645 678 ntBASIC10.6□□□□□ -0.71
Clk1P22518 Gm12997-201ENSMUST00000120207 640 ntBASIC10.6□□□□□ -0.71
Clk1P22518 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.6□□□□□ -0.71
Clk1P22518 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.6□□□□□ -0.71
Clk1P22518 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.6□□□□□ -0.71
Clk1P22518 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Clk1P22518 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.6□□□□□ -0.71
Clk1P22518 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.6□□□□□ -0.71
Clk1P22518 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.6□□□□□ -0.71
Clk1P22518 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.6□□□□□ -0.71
Clk1P22518 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.6□□□□□ -0.71
Clk1P22518 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.6□□□□□ -0.71
Clk1P22518 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Clk1P22518 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Clk1P22518 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.6□□□□□ -0.71
Clk1P22518 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms