Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rb1P13405 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rb1P13405 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Rb1P13405 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rb1P13405 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rb1P13405 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rb1P13405 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.65□□□□□ -0.55
Rb1P13405 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Rb1P13405 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rb1P13405 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Rb1P13405 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.65□□□□□ -0.55
Rb1P13405 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Rb1P13405 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rb1P13405 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.65□□□□□ -0.55
Rb1P13405 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rb1P13405 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rb1P13405 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Rb1P13405 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.64□□□□□ -0.55
Rb1P13405 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Rb1P13405 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.64□□□□□ -0.55
Rb1P13405 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Rb1P13405 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Rb1P13405 Gm11836-201ENSMUST00000121022 441 ntBASIC11.64□□□□□ -0.55
Rb1P13405 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Mir1956-201ENSMUST00000157748 65 ntBASIC11.64□□□□□ -0.55
Rb1P13405 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Gm4310-201ENSMUST00000177847 889 ntBASIC11.64□□□□□ -0.55
Rb1P13405 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.64□□□□□ -0.55
Rb1P13405 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Rb1P13405 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.64□□□□□ -0.55
Rb1P13405 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.64□□□□□ -0.55
Rb1P13405 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Rb1P13405 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rb1P13405 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.64□□□□□ -0.55
Rb1P13405 Gm43143-201ENSMUST00000196083 2023 ntBASIC11.64□□□□□ -0.55
Rb1P13405 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.63□□□□□ -0.55
Rb1P13405 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Rb1P13405 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.63□□□□□ -0.55
Rb1P13405 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Rb1P13405 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Rb1P13405 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.63□□□□□ -0.55
Rb1P13405 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.63□□□□□ -0.55
Rb1P13405 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Rb1P13405 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Rb1P13405 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.63□□□□□ -0.55
Rb1P13405 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Rb1P13405 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Rb1P13405 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.63□□□□□ -0.55
Rb1P13405 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rb1P13405 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Rb1P13405 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Rb1P13405 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 CT009601.1-201ENSMUST00000225567 2705 ntBASIC11.62□□□□□ -0.55
Rb1P13405 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms