Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxc6P10629 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc6P10629 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc6P10629 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc6P10629 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Hoxc6P10629 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Hoxc6P10629 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.49□□□□□ -0.41
Hoxc6P10629 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.49□□□□□ -0.41
Hoxc6P10629 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Hoxc6P10629 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Gm43167-201ENSMUST00000202001 1606 ntBASIC12.49□□□□□ -0.41
Hoxc6P10629 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Gm6630-201ENSMUST00000119199 454 ntBASIC12.49□□□□□ -0.41
Hoxc6P10629 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Gm14113-201ENSMUST00000121399 976 ntBASIC12.49□□□□□ -0.41
Hoxc6P10629 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC12.49□□□□□ -0.41
Hoxc6P10629 Gm27440-201ENSMUST00000184785 107 ntBASIC12.49□□□□□ -0.41
Hoxc6P10629 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.49□□□□□ -0.41
Hoxc6P10629 Lect2-202ENSMUST00000225183 823 ntBASIC12.49□□□□□ -0.41
Hoxc6P10629 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.49□□□□□ -0.41
Hoxc6P10629 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Mir326-201ENSMUST00000083637 95 ntBASIC12.49□□□□□ -0.41
Hoxc6P10629 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Hoxc6P10629 Gm6478-201ENSMUST00000099450 742 ntBASIC12.49□□□□□ -0.41
Hoxc6P10629 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc6P10629 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Hoxc6P10629 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.49□□□□□ -0.41
Hoxc6P10629 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc6P10629 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc6P10629 AC022682.1-201ENSMUST00000224624 2023 ntBASIC12.49□□□□□ -0.41
Hoxc6P10629 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Hoxc6P10629 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc6P10629 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc6P10629 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc6P10629 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.48□□□□□ -0.41
Hoxc6P10629 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc6P10629 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc6P10629 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.48□□□□□ -0.41
Hoxc6P10629 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc6P10629 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
Hoxc6P10629 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Hoxc6P10629 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc6P10629 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hoxc6P10629 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hoxc6P10629 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc6P10629 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.48□□□□□ -0.41
Hoxc6P10629 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc6P10629 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc6P10629 Gm18733-202ENSMUST00000174447 401 ntBASIC12.48□□□□□ -0.41
Hoxc6P10629 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.48□□□□□ -0.41
Hoxc6P10629 Gm7627-201ENSMUST00000183205 999 ntBASIC12.48□□□□□ -0.41
Hoxc6P10629 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC12.48□□□□□ -0.41
Hoxc6P10629 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.48□□□□□ -0.41
Hoxc6P10629 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.48□□□□□ -0.41
Hoxc6P10629 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.48□□□□□ -0.41
Hoxc6P10629 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.48□□□□□ -0.41
Hoxc6P10629 Gm45527-201ENSMUST00000211052 774 ntBASIC12.48□□□□□ -0.41
Hoxc6P10629 AC152169.1-201ENSMUST00000223901 701 ntBASIC12.48□□□□□ -0.41
Hoxc6P10629 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc6P10629 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hoxc6P10629 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Hoxc6P10629 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.48□□□□□ -0.41
Hoxc6P10629 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc6P10629 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Hoxc6P10629 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc6P10629 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc6P10629 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxc6P10629 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms