Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxb3P09026 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Hoxb3P09026 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxb3P09026 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxb3P09026 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxb3P09026 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxb3P09026 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxb3P09026 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxb3P09026 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxb3P09026 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.52□□□□□ -0.56
Hoxb3P09026 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
Hoxb3P09026 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxb3P09026 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxb3P09026 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hoxb3P09026 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hoxb3P09026 BC043934-202ENSMUST00000185694 2356 ntBASIC11.52□□□□□ -0.57
Hoxb3P09026 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Coa4-202ENSMUST00000120454 742 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Gm14908-201ENSMUST00000120930 1286 ntBASIC11.52□□□□□ -0.57
Hoxb3P09026 Gm7150-201ENSMUST00000122032 981 ntBASIC11.52□□□□□ -0.57
Hoxb3P09026 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC11.52□□□□□ -0.57
Hoxb3P09026 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Gm6918-201ENSMUST00000167622 1222 ntBASIC11.52□□□□□ -0.57
Hoxb3P09026 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.52□□□□□ -0.57
Hoxb3P09026 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.52□□□□□ -0.57
Hoxb3P09026 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Gm3551-201ENSMUST00000190750 664 ntBASIC11.52□□□□□ -0.57
Hoxb3P09026 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.52□□□□□ -0.57
Hoxb3P09026 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Hoxb3P09026 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxb3P09026 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Gm7242-201ENSMUST00000221134 705 ntBASIC11.52□□□□□ -0.57
Hoxb3P09026 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC11.52□□□□□ -0.57
Hoxb3P09026 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hoxb3P09026 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hoxb3P09026 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hoxb3P09026 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.52□□□□□ -0.57
Hoxb3P09026 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Hoxb3P09026 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxb3P09026 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.52□□□□□ -0.57
Hoxb3P09026 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.52□□□□□ -0.57
Hoxb3P09026 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.52□□□□□ -0.57
Hoxb3P09026 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Hoxb3P09026 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb3P09026 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hoxb3P09026 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hoxb3P09026 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxb3P09026 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hoxb3P09026 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxb3P09026 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Hoxb3P09026 Gm11540-201ENSMUST00000117457 780 ntBASIC11.51□□□□□ -0.57
Hoxb3P09026 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.51□□□□□ -0.57
Hoxb3P09026 Gm15982-201ENSMUST00000121681 554 ntBASIC11.51□□□□□ -0.57
Hoxb3P09026 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Gm16184-201ENSMUST00000162324 573 ntBASIC11.51□□□□□ -0.57
Hoxb3P09026 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb3P09026 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.51□□□□□ -0.57
Hoxb3P09026 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms