Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.81□□□□□ -0.68
Hcn1O88704 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.81□□□□□ -0.68
Hcn1O88704 Gm37986-201ENSMUST00000193285 383 ntBASIC10.81□□□□□ -0.68
Hcn1O88704 Gm42997-202ENSMUST00000200321 985 ntBASIC10.81□□□□□ -0.68
Hcn1O88704 Gm45113-201ENSMUST00000207518 165 ntBASIC10.81□□□□□ -0.68
Hcn1O88704 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.81□□□□□ -0.68
Hcn1O88704 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.81□□□□□ -0.68
Hcn1O88704 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hcn1O88704 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hcn1O88704 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.8□□□□□ -0.68
Hcn1O88704 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hcn1O88704 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.8□□□□□ -0.68
Hcn1O88704 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hcn1O88704 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hcn1O88704 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hcn1O88704 Gm8731-201ENSMUST00000118088 412 ntBASIC10.8□□□□□ -0.68
Hcn1O88704 Gm11783-201ENSMUST00000119549 885 ntBASIC10.8□□□□□ -0.68
Hcn1O88704 Gm13408-201ENSMUST00000119822 798 ntBASIC10.8□□□□□ -0.68
Hcn1O88704 Gm13935-201ENSMUST00000121859 798 ntBASIC10.8□□□□□ -0.68
Hcn1O88704 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Hcn1O88704 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Hcn1O88704 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.8□□□□□ -0.68
Hcn1O88704 Gm29499-201ENSMUST00000189151 486 ntBASIC10.8□□□□□ -0.68
Hcn1O88704 Gm28329-201ENSMUST00000191208 689 ntBASIC10.8□□□□□ -0.68
Hcn1O88704 Gm29171-201ENSMUST00000191397 486 ntBASIC10.8□□□□□ -0.68
Hcn1O88704 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.8□□□□□ -0.68
Hcn1O88704 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.8□□□□□ -0.68
Hcn1O88704 Mir7686-201ENSMUST00000200604 57 ntBASIC10.8□□□□□ -0.68
Hcn1O88704 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Gm8959-201ENSMUST00000213150 571 ntBASIC10.8□□□□□ -0.68
Hcn1O88704 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.8□□□□□ -0.68
Hcn1O88704 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Gm10254-201ENSMUST00000052888 867 ntBASIC10.8□□□□□ -0.68
Hcn1O88704 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hcn1O88704 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.8□□□□□ -0.68
Hcn1O88704 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hcn1O88704 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hcn1O88704 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hcn1O88704 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Hcn1O88704 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Hcn1O88704 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Hcn1O88704 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Hcn1O88704 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Hcn1O88704 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Hcn1O88704 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Hcn1O88704 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Hcn1O88704 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Hcn1O88704 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Hcn1O88704 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Hcn1O88704 n-R5s14-201ENSMUST00000122688 107 ntBASIC10.79□□□□□ -0.68
Hcn1O88704 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.79□□□□□ -0.68
Hcn1O88704 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.79□□□□□ -0.68
Hcn1O88704 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Hcn1O88704 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Gm9211-201ENSMUST00000182882 975 ntBASIC10.79□□□□□ -0.68
Hcn1O88704 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.79□□□□□ -0.68
Hcn1O88704 Gm9540-201ENSMUST00000188230 478 ntBASIC10.79□□□□□ -0.68
Hcn1O88704 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.79□□□□□ -0.68
Hcn1O88704 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms