Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Gm43058-201ENSMUST00000197645 625 ntBASIC11.41□□□□□ -0.58
Tnfrsf11bO08712 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfrsf11bO08712 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.41□□□□□ -0.58
Tnfrsf11bO08712 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.41□□□□□ -0.58
Tnfrsf11bO08712 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfrsf11bO08712 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Tnfrsf11bO08712 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfrsf11bO08712 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfrsf11bO08712 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfrsf11bO08712 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfrsf11bO08712 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Tnfrsf11bO08712 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Tnfrsf11bO08712 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Tnfrsf11bO08712 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Tnfrsf11bO08712 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfrsf11bO08712 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfrsf11bO08712 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Gm37246-201ENSMUST00000192665 835 ntBASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Gm8574-201ENSMUST00000203207 924 ntBASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfrsf11bO08712 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Tnfrsf11bO08712 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfrsf11bO08712 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.4□□□□□ -0.59
Tnfrsf11bO08712 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfrsf11bO08712 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfrsf11bO08712 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Gm24990-201ENSMUST00000157406 323 ntBASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Gm18367-201ENSMUST00000176139 600 ntBASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Gm2517-201ENSMUST00000215651 348 ntBASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.39□□□□□ -0.59
Tnfrsf11bO08712 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms