Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.58□□□□□ -0.56
Atf6F6VAN0 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.58□□□□□ -0.56
Atf6F6VAN0 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Atf6F6VAN0 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf6F6VAN0 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Atf6F6VAN0 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf6F6VAN0 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Atf6F6VAN0 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.58□□□□□ -0.56
Atf6F6VAN0 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Atf6F6VAN0 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.58□□□□□ -0.56
Atf6F6VAN0 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.57□□□□□ -0.56
Atf6F6VAN0 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Gm13045-201ENSMUST00000119019 712 ntBASIC11.57□□□□□ -0.56
Atf6F6VAN0 Gm15374-201ENSMUST00000119313 844 ntBASIC11.57□□□□□ -0.56
Atf6F6VAN0 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.57□□□□□ -0.56
Atf6F6VAN0 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Gm22144-201ENSMUST00000157402 102 ntBASIC11.57□□□□□ -0.56
Atf6F6VAN0 Gm23699-201ENSMUST00000158835 135 ntBASIC11.57□□□□□ -0.56
Atf6F6VAN0 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Gm43852-201ENSMUST00000202098 917 ntBASIC11.57□□□□□ -0.56
Atf6F6VAN0 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.57□□□□□ -0.56
Atf6F6VAN0 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.57□□□□□ -0.56
Atf6F6VAN0 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.57□□□□□ -0.56
Atf6F6VAN0 Spcs1-203ENSMUST00000226374 592 ntBASIC11.57□□□□□ -0.56
Atf6F6VAN0 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Atf6F6VAN0 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.57□□□□□ -0.56
Atf6F6VAN0 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.57□□□□□ -0.56
Atf6F6VAN0 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.57□□□□□ -0.56
Atf6F6VAN0 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.56□□□□□ -0.56
Atf6F6VAN0 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.56□□□□□ -0.56
Atf6F6VAN0 Gm11836-201ENSMUST00000121022 441 ntBASIC11.56□□□□□ -0.56
Atf6F6VAN0 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Gm22846-201ENSMUST00000157706 270 ntBASIC11.56□□□□□ -0.56
Atf6F6VAN0 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.56□□□□□ -0.56
Atf6F6VAN0 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Gm37981-201ENSMUST00000194280 535 ntBASIC11.56□□□□□ -0.56
Atf6F6VAN0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6F6VAN0 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.56□□□□□ -0.56
Atf6F6VAN0 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Atf6F6VAN0 Gm45696-201ENSMUST00000212088 985 ntBASIC11.56□□□□□ -0.56
Atf6F6VAN0 AC159246.1-201ENSMUST00000214478 249 ntBASIC11.56□□□□□ -0.56
Atf6F6VAN0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms