Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Gm12165-201ENSMUST00000117047 342 ntBASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Gm6754-201ENSMUST00000117124 913 ntBASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Gm12579-201ENSMUST00000118040 783 ntBASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Gm13045-201ENSMUST00000119019 712 ntBASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Gm10051-201ENSMUST00000145209 414 ntBASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 AC153961.1-201ENSMUST00000217760 385 ntBASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sec61a2Q9JLR1 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Gm11941-201ENSMUST00000119904 610 ntBASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Gm15595-201ENSMUST00000120840 961 ntBASIC10.16□□□□□ -0.78
Sec61a2Q9JLR1 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms