Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Gm5051-201ENSMUST00000204085 485 ntBASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Gm44126-201ENSMUST00000204831 514 ntBASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Gm9111-201ENSMUST00000219394 709 ntBASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Gm5739-201ENSMUST00000208601 1703 ntBASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Gm14892-201ENSMUST00000117636 267 ntBASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Gm11451-201ENSMUST00000118946 630 ntBASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Gm22138-201ENSMUST00000158748 128 ntBASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Gm3786-201ENSMUST00000202659 378 ntBASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Gm18561-201ENSMUST00000206027 804 ntBASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Upk3aQ9JKX8 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Upk3aQ9JKX8 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Upk3aQ9JKX8 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Upk3aQ9JKX8 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.8□□□□□ -0.68
Upk3aQ9JKX8 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Upk3aQ9JKX8 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.8□□□□□ -0.68
Upk3aQ9JKX8 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.8□□□□□ -0.68
Upk3aQ9JKX8 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Upk3aQ9JKX8 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.8□□□□□ -0.68
Upk3aQ9JKX8 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Upk3aQ9JKX8 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Upk3aQ9JKX8 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.8□□□□□ -0.68
Upk3aQ9JKX8 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Upk3aQ9JKX8 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms