Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Plk4-201ENSMUST00000026858 3479 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Tomt-201ENSMUST00000106969 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Trpv5-202ENSMUST00000193503 2025 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Utp6-201ENSMUST00000043152 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Smyd1-201ENSMUST00000074301 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Gm5866-201ENSMUST00000177881 973 ntBASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Gm5356-201ENSMUST00000093326 615 ntBASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Pard3b-201ENSMUST00000046673 3426 ntTSL 5 BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Olfr429-202ENSMUST00000216346 2510 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Wdr93-201ENSMUST00000035622 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Gm44531-201ENSMUST00000208364 2000 ntBASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Gm36638-202ENSMUST00000192073 2169 ntBASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trem1Q9JKE2 Gm21276-201ENSMUST00000179666 2626 ntBASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Meis2-203ENSMUST00000102538 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Meis2-201ENSMUST00000028639 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Krt78-201ENSMUST00000164932 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Gm9866-205ENSMUST00000220998 1973 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Patj-205ENSMUST00000107030 2104 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Nfam1-202ENSMUST00000100377 2881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Zadh2-201ENSMUST00000060223 3321 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Gm24644-201ENSMUST00000157114 139 ntBASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms