Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
TpbpbQ9CQC0 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
TpbpbQ9CQC0 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
TpbpbQ9CQC0 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
TpbpbQ9CQC0 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
TpbpbQ9CQC0 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
TpbpbQ9CQC0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.05□□□□□ -0.8
TpbpbQ9CQC0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.05□□□□□ -0.8
TpbpbQ9CQC0 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
TpbpbQ9CQC0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
TpbpbQ9CQC0 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
TpbpbQ9CQC0 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
TpbpbQ9CQC0 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Gm27046-201ENSMUST00000182160 463 ntBASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Gm7940-201ENSMUST00000218195 769 ntBASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
TpbpbQ9CQC0 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Gm8320-201ENSMUST00000177584 1762 ntBASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Gm8303-201ENSMUST00000178371 1762 ntBASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Gm8331-201ENSMUST00000178433 1762 ntBASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Gm11222-201ENSMUST00000119005 738 ntBASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Gm29396-201ENSMUST00000185659 716 ntBASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Gm4857-201ENSMUST00000192718 785 ntBASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Gm38002-201ENSMUST00000193255 180 ntBASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Gm31256-201ENSMUST00000194705 506 ntBASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Gm10608-202ENSMUST00000213924 676 ntBASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Gzmn-202ENSMUST00000225535 989 ntBASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
TpbpbQ9CQC0 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms