Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm22885-201ENSMUST00000157410 107 ntBASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.96□□□□□ -0.65
Rnf111Q99ML9 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Gm16505-201ENSMUST00000179981 232 ntBASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Gm2965-201ENSMUST00000198365 343 ntBASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Gm45574-201ENSMUST00000210921 331 ntBASIC10.96□□□□□ -0.65
Rnf111Q99ML9 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf111Q99ML9 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Rnf111Q99ML9 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Rnf111Q99ML9 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf111Q99ML9 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Rnf111Q99ML9 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf111Q99ML9 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf111Q99ML9 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf111Q99ML9 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf111Q99ML9 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.96□□□□□ -0.66
Rnf111Q99ML9 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.96□□□□□ -0.66
Rnf111Q99ML9 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf111Q99ML9 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rnf111Q99ML9 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.96□□□□□ -0.66
Rnf111Q99ML9 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.95□□□□□ -0.66
Rnf111Q99ML9 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Gm8815-201ENSMUST00000173809 620 ntBASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Gm8100-201ENSMUST00000182906 988 ntBASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Mir6927-201ENSMUST00000184494 71 ntBASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.95□□□□□ -0.66
Rnf111Q99ML9 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf111Q99ML9 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Rnf111Q99ML9 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf111Q99ML9 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.94□□□□□ -0.66
Rnf111Q99ML9 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf111Q99ML9 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf111Q99ML9 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
Rnf111Q99ML9 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.94□□□□□ -0.66
Rnf111Q99ML9 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf111Q99ML9 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf111Q99ML9 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf111Q99ML9 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf111Q99ML9 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf111Q99ML9 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf111Q99ML9 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf111Q99ML9 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.94□□□□□ -0.66
Rnf111Q99ML9 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf111Q99ML9 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Rnf111Q99ML9 Gm7857-201ENSMUST00000117957 358 ntBASIC10.94□□□□□ -0.66
Rnf111Q99ML9 Gm12217-201ENSMUST00000118858 696 ntBASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms