Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 AC164099.1-201ENSMUST00000227780 333 ntBASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Gm6478-201ENSMUST00000099450 742 ntBASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-1Q99MA9 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Gm11475-201ENSMUST00000118482 476 ntBASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Gm8302-201ENSMUST00000119217 852 ntBASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Gm15136-201ENSMUST00000120552 533 ntBASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Gm21778-201ENSMUST00000178779 471 ntBASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Gm28975-201ENSMUST00000186412 686 ntBASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Gm8384-201ENSMUST00000190905 704 ntBASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Gm9102-201ENSMUST00000219250 465 ntBASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 AC164556.1-201ENSMUST00000221318 751 ntBASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-1Q99MA9 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Gm25569-201ENSMUST00000157175 131 ntBASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nkx6-1Q99MA9 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms