Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.16□□□□□ -0.46
TraipQ8VIG6 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Cd8a-201ENSMUST00000066747 3128 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.15□□□□□ -0.46
TraipQ8VIG6 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Gm4917-201ENSMUST00000121452 650 ntBASIC12.15□□□□□ -0.46
TraipQ8VIG6 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Gm11675-201ENSMUST00000121873 832 ntBASIC12.15□□□□□ -0.46
TraipQ8VIG6 Gm15280-201ENSMUST00000126961 640 ntBASIC12.15□□□□□ -0.46
TraipQ8VIG6 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Gm22379-201ENSMUST00000157480 131 ntBASIC12.15□□□□□ -0.46
TraipQ8VIG6 Gm23218-201ENSMUST00000158124 276 ntBASIC12.15□□□□□ -0.46
TraipQ8VIG6 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.15□□□□□ -0.46
TraipQ8VIG6 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.15□□□□□ -0.46
TraipQ8VIG6 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Gm16380-201ENSMUST00000077997 478 ntBASIC12.15□□□□□ -0.46
TraipQ8VIG6 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TraipQ8VIG6 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.15□□□□□ -0.47
TraipQ8VIG6 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
TraipQ8VIG6 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
TraipQ8VIG6 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
TraipQ8VIG6 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TraipQ8VIG6 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TraipQ8VIG6 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.14□□□□□ -0.47
TraipQ8VIG6 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Gm11652-201ENSMUST00000117842 1267 ntBASIC12.14□□□□□ -0.47
TraipQ8VIG6 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.14□□□□□ -0.47
TraipQ8VIG6 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.14□□□□□ -0.47
TraipQ8VIG6 Gm15197-201ENSMUST00000120526 478 ntBASIC12.14□□□□□ -0.47
TraipQ8VIG6 Gm17046-201ENSMUST00000168078 850 ntBASIC12.14□□□□□ -0.47
TraipQ8VIG6 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.14□□□□□ -0.47
TraipQ8VIG6 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.14□□□□□ -0.47
TraipQ8VIG6 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.14□□□□□ -0.47
TraipQ8VIG6 Gm18514-201ENSMUST00000218980 436 ntBASIC12.14□□□□□ -0.47
TraipQ8VIG6 Id2-203ENSMUST00000222667 958 ntBASIC12.14□□□□□ -0.47
TraipQ8VIG6 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.14□□□□□ -0.47
TraipQ8VIG6 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.14□□□□□ -0.47
TraipQ8VIG6 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms