Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Gm45598-202ENSMUST00000210719 986 ntBASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Gm45865-201ENSMUST00000211815 945 ntBASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Gm37307-201ENSMUST00000193663 2621 ntBASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Gm11511-201ENSMUST00000118146 540 ntBASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Gm6114-201ENSMUST00000182472 968 ntBASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Gm4607-201ENSMUST00000206649 577 ntBASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Cts7-204ENSMUST00000225321 1257 ntBASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Pcdh18Q8VHR0 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Gm11700-201ENSMUST00000119409 403 ntBASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Ap1g1-206ENSMUST00000179104 1096 ntBASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Mir8109-201ENSMUST00000184375 117 ntBASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Gm32999-201ENSMUST00000192693 562 ntBASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Gm44364-201ENSMUST00000198368 141 ntBASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Rprl1-202ENSMUST00000198476 238 ntBASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Gm19287-201ENSMUST00000203190 358 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms