Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Gm18986-201ENSMUST00000216029 1986 ntBASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Gm14398-201ENSMUST00000117287 1073 ntBASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Gm44917-201ENSMUST00000208798 520 ntBASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Gm3926-201ENSMUST00000223378 1123 ntBASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 CT010505.2-201ENSMUST00000227918 998 ntBASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Gm43152-201ENSMUST00000202495 1638 ntBASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx54Q8K4L0 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Gm6238-201ENSMUST00000120999 465 ntBASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Gm20091-201ENSMUST00000179683 189 ntBASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Gm5342-201ENSMUST00000181982 1003 ntBASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Mir7088-201ENSMUST00000184227 86 ntBASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Gm5738-201ENSMUST00000206016 779 ntBASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 AC122891.1-201ENSMUST00000218671 268 ntBASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Gm9701-201ENSMUST00000077976 427 ntBASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Gm14005-209ENSMUST00000224993 1832 ntBASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx54Q8K4L0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Gm13688-201ENSMUST00000121557 608 ntBASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Gm14699-201ENSMUST00000122340 228 ntBASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms