Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Gm25148-201ENSMUST00000104611 123 ntBASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Gm15374-201ENSMUST00000119313 844 ntBASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Gm11573-201ENSMUST00000119956 394 ntBASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Gm24074-201ENSMUST00000158178 260 ntBASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Gm43058-201ENSMUST00000197645 625 ntBASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cchcr1Q8K2I2 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Gm14028-201ENSMUST00000117434 479 ntBASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cchcr1Q8K2I2 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cchcr1Q8K2I2 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms