Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Gm44967-201ENSMUST00000207047 631 ntBASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Gm6108-201ENSMUST00000208365 367 ntBASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Gm8913-201ENSMUST00000209491 641 ntBASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Gm6867-201ENSMUST00000219165 425 ntBASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Gm24255-201ENSMUST00000104481 128 ntBASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Gm13996-201ENSMUST00000118456 430 ntBASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Gm8566-201ENSMUST00000120174 465 ntBASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Gm8459-201ENSMUST00000162504 760 ntBASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Mir8109-201ENSMUST00000184375 117 ntBASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Gm45575-201ENSMUST00000210283 548 ntBASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28aQ8CEI3 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Mir7085-201ENSMUST00000184353 66 ntBASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Gm38341-201ENSMUST00000195357 515 ntBASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Gm44364-201ENSMUST00000198368 141 ntBASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms