Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Gm45575-201ENSMUST00000210283 548 ntBASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Gm6082-201ENSMUST00000215204 454 ntBASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Gm6722-201ENSMUST00000221586 390 ntBASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp2bQ8BJF9 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Gm15198-201ENSMUST00000117283 177 ntBASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Gm8815-201ENSMUST00000173809 620 ntBASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Gm7003-201ENSMUST00000195089 312 ntBASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Gm43179-201ENSMUST00000198797 275 ntBASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2bQ8BJF9 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms