Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Gm12389-201ENSMUST00000117696 418 ntBASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Gm15746-201ENSMUST00000120684 1027 ntBASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Gm14113-201ENSMUST00000121399 976 ntBASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Gm26957-201ENSMUST00000182645 977 ntBASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Gm37207-201ENSMUST00000194284 296 ntBASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Gm2474-201ENSMUST00000195162 559 ntBASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Gm9369-201ENSMUST00000196009 733 ntBASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Gm43371-201ENSMUST00000202838 1031 ntBASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Gm43811-201ENSMUST00000202862 695 ntBASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 CT009754.4-201ENSMUST00000221430 565 ntBASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 AC166361.2-201ENSMUST00000219269 1415 ntBASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ccdc85bQ6PDY0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Gm23604-201ENSMUST00000104311 132 ntBASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Gm12684-201ENSMUST00000118675 999 ntBASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Gm26313-201ENSMUST00000157770 308 ntBASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Mir6387-201ENSMUST00000184042 108 ntBASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Zcwpw2-203ENSMUST00000187803 372 ntBASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Gm43997-201ENSMUST00000203986 1005 ntBASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Gm18256-201ENSMUST00000209087 907 ntBASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc85bQ6PDY0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms