Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Gm23949-201ENSMUST00000104027 127 ntBASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Gm23596-201ENSMUST00000104304 132 ntBASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Gm7150-201ENSMUST00000122032 981 ntBASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Gm37666-201ENSMUST00000194110 866 ntBASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Gm5714-201ENSMUST00000197343 566 ntBASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smarcd3Q6P9Z1 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Gm15711-201ENSMUST00000118889 535 ntBASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Gm10807-201ENSMUST00000177134 795 ntBASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Gm38151-201ENSMUST00000195085 289 ntBASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smarcd3Q6P9Z1 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms