Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Gm12250-201ENSMUST00000119467 1274 ntBASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Gm7180-201ENSMUST00000121753 513 ntBASIC5.73□□□□□ -1.49
Ush2AQ2QI47 6330549D23Rik-202ENSMUST00000159536 1102 ntBASIC5.73□□□□□ -1.49
Ush2AQ2QI47 AC140409.1-202ENSMUST00000216792 432 ntTSL 5 BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Ces5a-201ENSMUST00000077816 1728 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Gm8848-201ENSMUST00000197270 1343 ntBASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Tmem267-204ENSMUST00000178948 1648 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Gm35618-201ENSMUST00000223164 1606 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Gm19692-201ENSMUST00000203856 2084 ntBASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Gm13792-201ENSMUST00000121350 423 ntBASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Opn1mw-201ENSMUST00000033771 1227 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Calr3-202ENSMUST00000109974 1371 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Gm6727-201ENSMUST00000204102 1518 ntBASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 1700009J07Rik-201ENSMUST00000178996 912 ntTSL 5 BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Gm45134-201ENSMUST00000206046 1189 ntBASIC5.73□□□□□ -1.49
Ush2AQ2QI47 AC167202.2-201ENSMUST00000220155 296 ntBASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Gm2915-201ENSMUST00000222565 787 ntBASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Sncg-201ENSMUST00000023826 852 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Cyp2b13-201ENSMUST00000005669 1875 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Gm12361-201ENSMUST00000119806 1044 ntBASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Gm18182-201ENSMUST00000191380 1251 ntBASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Olfr326-ps1-201ENSMUST00000204790 392 ntBASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 AC153845.1-201ENSMUST00000213596 428 ntBASIC5.73□□□□□ -1.49
Ush2AQ2QI47 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 AC154482.1-201ENSMUST00000223248 2483 ntBASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ush2AQ2QI47 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 AC122860.2-201ENSMUST00000217967 2671 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm38379-201ENSMUST00000194351 1525 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm22659-201ENSMUST00000104195 130 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm8865-201ENSMUST00000125697 430 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 4933428C19Rik-201ENSMUST00000146043 818 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Mrgpra3-201ENSMUST00000176369 1295 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 1700065J18Rik-202ENSMUST00000190576 387 ntTSL 3 BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm6236-201ENSMUST00000193785 1009 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 D830044I16Rik-205ENSMUST00000206296 845 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm43869-201ENSMUST00000204742 1405 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm7823-201ENSMUST00000120761 1623 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm11605-201ENSMUST00000120413 646 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm12136-201ENSMUST00000120460 1209 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms