Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col9a2Q07643 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.2□□□□□ -0.46
Col9a2Q07643 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC12.19□□□□□ -0.46
Col9a2Q07643 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.19□□□□□ -0.46
Col9a2Q07643 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Gm11380-201ENSMUST00000118067 560 ntBASIC12.19□□□□□ -0.46
Col9a2Q07643 Gm25830-201ENSMUST00000158923 132 ntBASIC12.19□□□□□ -0.46
Col9a2Q07643 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.19□□□□□ -0.46
Col9a2Q07643 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Col9a2Q07643 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col9a2Q07643 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.19□□□□□ -0.46
Col9a2Q07643 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.19□□□□□ -0.46
Col9a2Q07643 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Col9a2Q07643 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.19□□□□□ -0.46
Col9a2Q07643 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col9a2Q07643 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.18□□□□□ -0.46
Col9a2Q07643 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.18□□□□□ -0.46
Col9a2Q07643 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.18□□□□□ -0.46
Col9a2Q07643 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.18□□□□□ -0.46
Col9a2Q07643 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Col9a2Q07643 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col9a2Q07643 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col9a2Q07643 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.18□□□□□ -0.46
Col9a2Q07643 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.18□□□□□ -0.46
Col9a2Q07643 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.18□□□□□ -0.46
Col9a2Q07643 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Mir453-201ENSMUST00000104732 82 ntBASIC12.18□□□□□ -0.46
Col9a2Q07643 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Gm12986-201ENSMUST00000119037 967 ntBASIC12.18□□□□□ -0.46
Col9a2Q07643 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.18□□□□□ -0.46
Col9a2Q07643 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.18□□□□□ -0.46
Col9a2Q07643 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Col9a2Q07643 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.18□□□□□ -0.46
Col9a2Q07643 Gm19927-201ENSMUST00000185792 781 ntBASIC12.18□□□□□ -0.46
Col9a2Q07643 Gm31274-201ENSMUST00000197356 229 ntBASIC12.18□□□□□ -0.46
Col9a2Q07643 Gm43506-201ENSMUST00000200675 753 ntBASIC12.18□□□□□ -0.46
Col9a2Q07643 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC12.18□□□□□ -0.46
Col9a2Q07643 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC12.18□□□□□ -0.46
Col9a2Q07643 Gm8255-201ENSMUST00000218693 305 ntBASIC12.18□□□□□ -0.46
Col9a2Q07643 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.18□□□□□ -0.46
Col9a2Q07643 Gm26670-202ENSMUST00000226862 340 ntBASIC12.18□□□□□ -0.46
Col9a2Q07643 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col9a2Q07643 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.18□□□□□ -0.46
Col9a2Q07643 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col9a2Q07643 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.18□□□□□ -0.46
Col9a2Q07643 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC12.18□□□□□ -0.46
Col9a2Q07643 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col9a2Q07643 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a2Q07643 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms