Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.36□□□□□ -0.59
Pfdn6Q03958 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pfdn6Q03958 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.35□□□□□ -0.59
Pfdn6Q03958 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.35□□□□□ -0.59
Pfdn6Q03958 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Gm44506-201ENSMUST00000206278 965 ntBASIC11.35□□□□□ -0.59
Pfdn6Q03958 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.35□□□□□ -0.59
Pfdn6Q03958 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pfdn6Q03958 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.34□□□□□ -0.59
Pfdn6Q03958 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Gm8731-201ENSMUST00000118088 412 ntBASIC11.34□□□□□ -0.59
Pfdn6Q03958 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.34□□□□□ -0.59
Pfdn6Q03958 Gm12997-201ENSMUST00000120207 640 ntBASIC11.34□□□□□ -0.59
Pfdn6Q03958 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pfdn6Q03958 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Mir6927-201ENSMUST00000184494 71 ntBASIC11.34□□□□□ -0.59
Pfdn6Q03958 Gm29199-201ENSMUST00000187766 775 ntBASIC11.34□□□□□ -0.59
Pfdn6Q03958 Gm9540-201ENSMUST00000188230 478 ntBASIC11.34□□□□□ -0.59
Pfdn6Q03958 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.34□□□□□ -0.59
Pfdn6Q03958 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Gm6722-201ENSMUST00000221586 390 ntBASIC11.34□□□□□ -0.59
Pfdn6Q03958 Gm1821-202ENSMUST00000227415 750 ntBASIC11.34□□□□□ -0.59
Pfdn6Q03958 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.34□□□□□ -0.59
Pfdn6Q03958 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.34□□□□□ -0.59
Pfdn6Q03958 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pfdn6Q03958 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms