Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.64□□□□□ -0.87
Smn1P97801 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.64□□□□□ -0.87
Smn1P97801 Gm26047-202ENSMUST00000198840 115 ntBASIC9.64□□□□□ -0.87
Smn1P97801 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Smn1P97801 Gm9353-201ENSMUST00000200472 604 ntBASIC9.64□□□□□ -0.87
Smn1P97801 Gm45113-201ENSMUST00000207518 165 ntBASIC9.64□□□□□ -0.87
Smn1P97801 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.64□□□□□ -0.87
Smn1P97801 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.64□□□□□ -0.87
Smn1P97801 Gm9368-201ENSMUST00000219348 831 ntBASIC9.64□□□□□ -0.87
Smn1P97801 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Smn1P97801 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Smn1P97801 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Smn1P97801 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Smn1P97801 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.64□□□□□ -0.87
Smn1P97801 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Gm44190-201ENSMUST00000205083 1401 ntBASIC9.64□□□□□ -0.87
Smn1P97801 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.64□□□□□ -0.87
Smn1P97801 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.63□□□□□ -0.87
Smn1P97801 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Smn1P97801 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Smn1P97801 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.63□□□□□ -0.87
Smn1P97801 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Smn1P97801 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC9.63□□□□□ -0.87
Smn1P97801 Gm13296-201ENSMUST00000117854 997 ntBASIC9.63□□□□□ -0.87
Smn1P97801 Gm8343-201ENSMUST00000182705 994 ntBASIC9.63□□□□□ -0.87
Smn1P97801 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC9.63□□□□□ -0.87
Smn1P97801 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC9.63□□□□□ -0.87
Smn1P97801 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC9.63□□□□□ -0.87
Smn1P97801 Aprt-ps-201ENSMUST00000212311 505 ntBASIC9.63□□□□□ -0.87
Smn1P97801 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC9.63□□□□□ -0.87
Smn1P97801 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Gm18615-201ENSMUST00000222919 1031 ntBASIC9.63□□□□□ -0.87
Smn1P97801 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.63□□□□□ -0.87
Smn1P97801 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.63□□□□□ -0.87
Smn1P97801 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Smn1P97801 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Smn1P97801 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Smn1P97801 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Smn1P97801 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smn1P97801 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Smn1P97801 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Smn1P97801 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Smn1P97801 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.62□□□□□ -0.87
Smn1P97801 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 Gm5525-201ENSMUST00000190438 1312 ntBASIC9.62□□□□□ -0.87
Smn1P97801 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.62□□□□□ -0.87
Smn1P97801 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Smn1P97801 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms