Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm13226-201ENSMUST00000117838 404 ntBASIC9.45□□□□□ -0.9
Npas1P97459 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.45□□□□□ -0.9
Npas1P97459 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC9.45□□□□□ -0.9
Npas1P97459 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC9.45□□□□□ -0.9
Npas1P97459 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Npas1P97459 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC9.45□□□□□ -0.9
Npas1P97459 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Npas1P97459 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.45□□□□□ -0.9
Npas1P97459 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Npas1P97459 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Npas1P97459 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Npas1P97459 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Npas1P97459 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Npas1P97459 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.44□□□□□ -0.9
Npas1P97459 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.44□□□□□ -0.9
Npas1P97459 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Npas1P97459 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Prkag2-201ENSMUST00000030784 3331 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Npas1P97459 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC9.44□□□□□ -0.9
Npas1P97459 Gm12329-201ENSMUST00000120829 1007 ntBASIC9.44□□□□□ -0.9
Npas1P97459 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC9.44□□□□□ -0.9
Npas1P97459 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC9.44□□□□□ -0.9
Npas1P97459 Gm45784-201ENSMUST00000188360 142 ntBASIC9.44□□□□□ -0.9
Npas1P97459 Gm43133-201ENSMUST00000197472 463 ntBASIC9.44□□□□□ -0.9
Npas1P97459 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Npas1P97459 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC9.44□□□□□ -0.9
Npas1P97459 Gm17823-201ENSMUST00000217830 1006 ntBASIC9.44□□□□□ -0.9
Npas1P97459 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC9.44□□□□□ -0.9
Npas1P97459 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.44□□□□□ -0.9
Npas1P97459 AC140451.2-201ENSMUST00000228030 664 ntBASIC9.44□□□□□ -0.9
Npas1P97459 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Npas1P97459 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Npas1P97459 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC9.44□□□□□ -0.9
Npas1P97459 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Npas1P97459 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Npas1P97459 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.44□□□□□ -0.9
Npas1P97459 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC9.44□□□□□ -0.9
Npas1P97459 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.44□□□□□ -0.9
Npas1P97459 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.44□□□□□ -0.9
Npas1P97459 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Npas1P97459 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Npas1P97459 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Npas1P97459 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Npas1P97459 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Npas1P97459 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Npas1P97459 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Npas1P97459 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Npas1P97459 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Npas1P97459 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Npas1P97459 Rac2-201ENSMUST00000043214 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Npas1P97459 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Npas1P97459 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Npas1P97459 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Npas1P97459 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Npas1P97459 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Npas1P97459 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Npas1P97459 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Npas1P97459 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms