Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
ThraP63058 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ThraP63058 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ThraP63058 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
ThraP63058 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
ThraP63058 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
ThraP63058 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
ThraP63058 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
ThraP63058 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.46□□□□□ -0.58
ThraP63058 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.46□□□□□ -0.58
ThraP63058 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.46□□□□□ -0.58
ThraP63058 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
ThraP63058 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ThraP63058 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
ThraP63058 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
ThraP63058 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ThraP63058 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ThraP63058 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ThraP63058 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ThraP63058 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
ThraP63058 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ThraP63058 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
ThraP63058 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
ThraP63058 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.45□□□□□ -0.58
ThraP63058 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ThraP63058 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ThraP63058 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ThraP63058 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.45□□□□□ -0.58
ThraP63058 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ThraP63058 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
ThraP63058 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
ThraP63058 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.45□□□□□ -0.58
ThraP63058 Gm14193-201ENSMUST00000105067 153 ntBASIC11.45□□□□□ -0.58
ThraP63058 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.45□□□□□ -0.58
ThraP63058 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ThraP63058 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ThraP63058 Gm11628-201ENSMUST00000117568 171 ntBASIC11.45□□□□□ -0.58
ThraP63058 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.45□□□□□ -0.58
ThraP63058 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ThraP63058 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.45□□□□□ -0.58
ThraP63058 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.45□□□□□ -0.58
ThraP63058 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.45□□□□□ -0.58
ThraP63058 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ThraP63058 Gm6114-201ENSMUST00000182472 968 ntBASIC11.45□□□□□ -0.58
ThraP63058 Gm27910-201ENSMUST00000185004 107 ntBASIC11.45□□□□□ -0.58
ThraP63058 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.45□□□□□ -0.58
ThraP63058 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.45□□□□□ -0.58
ThraP63058 Gm43058-201ENSMUST00000197645 625 ntBASIC11.45□□□□□ -0.58
ThraP63058 Gm43186-201ENSMUST00000198130 824 ntBASIC11.45□□□□□ -0.58
ThraP63058 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.45□□□□□ -0.58
ThraP63058 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ThraP63058 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.45□□□□□ -0.58
ThraP63058 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.45□□□□□ -0.58
ThraP63058 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.45□□□□□ -0.58
ThraP63058 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.45□□□□□ -0.58
ThraP63058 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
ThraP63058 Gm6867-201ENSMUST00000219165 425 ntBASIC11.45□□□□□ -0.58
ThraP63058 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.45□□□□□ -0.58
ThraP63058 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ThraP63058 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ThraP63058 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ThraP63058 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ThraP63058 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ThraP63058 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ThraP63058 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
ThraP63058 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.45□□□□□ -0.58
ThraP63058 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.45□□□□□ -0.58
ThraP63058 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
ThraP63058 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.44□□□□□ -0.58
ThraP63058 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.44□□□□□ -0.58
ThraP63058 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.44□□□□□ -0.58
ThraP63058 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.44□□□□□ -0.58
ThraP63058 Gm11949-201ENSMUST00000117640 372 ntBASIC11.44□□□□□ -0.58
ThraP63058 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.44□□□□□ -0.58
ThraP63058 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.44□□□□□ -0.58
ThraP63058 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.44□□□□□ -0.58
ThraP63058 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Mir8115-201ENSMUST00000184992 119 ntBASIC11.44□□□□□ -0.58
ThraP63058 Gm44980-201ENSMUST00000205826 314 ntBASIC11.44□□□□□ -0.58
ThraP63058 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.44□□□□□ -0.58
ThraP63058 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
ThraP63058 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms