Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.41□□□□□ -0.58
Lhx3P50481 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Lhx3P50481 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Lhx3P50481 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx3P50481 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx3P50481 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx3P50481 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Lhx3P50481 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx3P50481 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx3P50481 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx3P50481 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx3P50481 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx3P50481 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Lhx3P50481 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx3P50481 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx3P50481 Gm3828-201ENSMUST00000121817 257 ntBASIC11.4□□□□□ -0.58
Lhx3P50481 Gm10169-201ENSMUST00000121822 348 ntBASIC11.4□□□□□ -0.58
Lhx3P50481 Gm12030-201ENSMUST00000121917 223 ntBASIC11.4□□□□□ -0.58
Lhx3P50481 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.4□□□□□ -0.58
Lhx3P50481 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
Lhx3P50481 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.4□□□□□ -0.58
Lhx3P50481 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx3P50481 Gm27438-201ENSMUST00000183480 110 ntBASIC11.4□□□□□ -0.58
Lhx3P50481 Mir7032-201ENSMUST00000185154 79 ntBASIC11.4□□□□□ -0.58
Lhx3P50481 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.4□□□□□ -0.58
Lhx3P50481 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.4□□□□□ -0.58
Lhx3P50481 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.4□□□□□ -0.58
Lhx3P50481 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.4□□□□□ -0.58
Lhx3P50481 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Lhx3P50481 Gm25580-201ENSMUST00000083409 327 ntBASIC11.4□□□□□ -0.58
Lhx3P50481 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx3P50481 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx3P50481 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx3P50481 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx3P50481 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx3P50481 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Lhx3P50481 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lhx3P50481 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.4□□□□□ -0.59
Lhx3P50481 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.4□□□□□ -0.59
Lhx3P50481 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Lhx3P50481 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lhx3P50481 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lhx3P50481 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lhx3P50481 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lhx3P50481 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lhx3P50481 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Lhx3P50481 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.4□□□□□ -0.59
Lhx3P50481 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lhx3P50481 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.39□□□□□ -0.59
Lhx3P50481 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.39□□□□□ -0.59
Lhx3P50481 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lhx3P50481 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.39□□□□□ -0.59
Lhx3P50481 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
Lhx3P50481 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Lhx3P50481 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Gm12986-201ENSMUST00000119037 967 ntBASIC11.39□□□□□ -0.59
Lhx3P50481 Gm12791-201ENSMUST00000120788 655 ntBASIC11.39□□□□□ -0.59
Lhx3P50481 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lhx3P50481 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.39□□□□□ -0.59
Lhx3P50481 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Snord55-201ENSMUST00000174939 79 ntBASIC11.39□□□□□ -0.59
Lhx3P50481 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.39□□□□□ -0.59
Lhx3P50481 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lhx3P50481 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.39□□□□□ -0.59
Lhx3P50481 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lhx3P50481 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.39□□□□□ -0.59
Lhx3P50481 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.39□□□□□ -0.59
Lhx3P50481 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lhx3P50481 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.39□□□□□ -0.59
Lhx3P50481 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lhx3P50481 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms