Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-6P43688 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-6P43688 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-6P43688 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-6P43688 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.7□□□□□ -0.7
Nkx2-6P43688 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Nkx2-6P43688 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-6P43688 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.69□□□□□ -0.7
Nkx2-6P43688 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.69□□□□□ -0.7
Nkx2-6P43688 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Gm12816-201ENSMUST00000118069 1212 ntBASIC10.69□□□□□ -0.7
Nkx2-6P43688 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Mir7051-201ENSMUST00000184167 73 ntBASIC10.69□□□□□ -0.7
Nkx2-6P43688 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Gm44008-201ENSMUST00000204345 412 ntBASIC10.69□□□□□ -0.7
Nkx2-6P43688 Gm18059-201ENSMUST00000208073 580 ntBASIC10.69□□□□□ -0.7
Nkx2-6P43688 Gm7082-201ENSMUST00000209880 969 ntBASIC10.69□□□□□ -0.7
Nkx2-6P43688 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.69□□□□□ -0.7
Nkx2-6P43688 Gm9111-201ENSMUST00000219394 709 ntBASIC10.69□□□□□ -0.7
Nkx2-6P43688 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.69□□□□□ -0.7
Nkx2-6P43688 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-6P43688 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-6P43688 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 BC043934-202ENSMUST00000185694 2356 ntBASIC10.68□□□□□ -0.7
Nkx2-6P43688 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.68□□□□□ -0.7
Nkx2-6P43688 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Gm11560-201ENSMUST00000117567 948 ntBASIC10.68□□□□□ -0.7
Nkx2-6P43688 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Gm18463-201ENSMUST00000207258 474 ntBASIC10.68□□□□□ -0.7
Nkx2-6P43688 Gm18460-201ENSMUST00000208088 464 ntBASIC10.68□□□□□ -0.7
Nkx2-6P43688 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.68□□□□□ -0.7
Nkx2-6P43688 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.68□□□□□ -0.7
Nkx2-6P43688 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-6P43688 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms