Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Mir669l-201ENSMUST00000103771 98 ntBASIC11.14□□□□□ -0.63
Sox18P43680 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.14□□□□□ -0.63
Sox18P43680 Gm14862-201ENSMUST00000115553 870 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Gm11957-201ENSMUST00000118304 779 ntBASIC11.14□□□□□ -0.63
Sox18P43680 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Gng5-ps-201ENSMUST00000120931 205 ntBASIC11.14□□□□□ -0.63
Sox18P43680 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC11.14□□□□□ -0.63
Sox18P43680 Gm13445-201ENSMUST00000121664 307 ntBASIC11.14□□□□□ -0.63
Sox18P43680 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.14□□□□□ -0.63
Sox18P43680 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC11.14□□□□□ -0.63
Sox18P43680 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sox18P43680 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC11.14□□□□□ -0.63
Sox18P43680 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC11.14□□□□□ -0.63
Sox18P43680 Gm9081-201ENSMUST00000182346 991 ntBASIC11.14□□□□□ -0.63
Sox18P43680 Gm18799-201ENSMUST00000189104 913 ntBASIC11.14□□□□□ -0.63
Sox18P43680 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sox18P43680 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Sox18P43680 Gm37826-201ENSMUST00000195329 322 ntBASIC11.14□□□□□ -0.63
Sox18P43680 Gm42783-201ENSMUST00000197075 795 ntBASIC11.14□□□□□ -0.63
Sox18P43680 Gm42782-201ENSMUST00000197286 522 ntBASIC11.14□□□□□ -0.63
Sox18P43680 Gm43380-201ENSMUST00000200421 220 ntBASIC11.14□□□□□ -0.63
Sox18P43680 Gm43671-201ENSMUST00000200422 433 ntBASIC11.14□□□□□ -0.63
Sox18P43680 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Sox18P43680 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.14□□□□□ -0.63
Sox18P43680 Gm30671-201ENSMUST00000214898 318 ntBASIC11.14□□□□□ -0.63
Sox18P43680 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 AC154484.1-201ENSMUST00000227311 771 ntBASIC11.14□□□□□ -0.63
Sox18P43680 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sox18P43680 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sox18P43680 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sox18P43680 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sox18P43680 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Sox18P43680 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sox18P43680 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox18P43680 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sox18P43680 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Gm12663-201ENSMUST00000118481 958 ntBASIC11.13□□□□□ -0.63
Sox18P43680 Gm13678-201ENSMUST00000118926 340 ntBASIC11.13□□□□□ -0.63
Sox18P43680 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC11.13□□□□□ -0.63
Sox18P43680 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.13□□□□□ -0.63
Sox18P43680 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox18P43680 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.13□□□□□ -0.63
Sox18P43680 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.13□□□□□ -0.63
Sox18P43680 Gm25226-201ENSMUST00000158198 123 ntBASIC11.13□□□□□ -0.63
Sox18P43680 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sox18P43680 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
Sox18P43680 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Gm27005-201ENSMUST00000182783 921 ntBASIC11.13□□□□□ -0.63
Sox18P43680 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Gm7985-201ENSMUST00000183329 981 ntBASIC11.13□□□□□ -0.63
Sox18P43680 Mir6973a-201ENSMUST00000183646 78 ntBASIC11.13□□□□□ -0.63
Sox18P43680 Gm6644-201ENSMUST00000186507 951 ntBASIC11.13□□□□□ -0.63
Sox18P43680 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Gm37599-201ENSMUST00000193067 489 ntBASIC11.13□□□□□ -0.63
Sox18P43680 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC11.13□□□□□ -0.63
Sox18P43680 Gm44124-201ENSMUST00000204159 472 ntBASIC11.13□□□□□ -0.63
Sox18P43680 Gm45113-201ENSMUST00000207518 165 ntBASIC11.13□□□□□ -0.63
Sox18P43680 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox18P43680 Gm45481-201ENSMUST00000209717 877 ntBASIC11.13□□□□□ -0.63
Sox18P43680 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox18P43680 Gm19885-201ENSMUST00000212853 343 ntBASIC11.13□□□□□ -0.63
Sox18P43680 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 AC159293.2-201ENSMUST00000222289 424 ntBASIC11.13□□□□□ -0.63
Sox18P43680 AC156574.1-201ENSMUST00000227084 452 ntBASIC11.13□□□□□ -0.63
Sox18P43680 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.13□□□□□ -0.63
Sox18P43680 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox18P43680 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox18P43680 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms