Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfsf9P41274 Gm43380-201ENSMUST00000200421 220 ntBASIC10.82□□□□□ -0.68
Tnfsf9P41274 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.82□□□□□ -0.68
Tnfsf9P41274 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfsf9P41274 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfsf9P41274 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfsf9P41274 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Tnfsf9P41274 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Tnfsf9P41274 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfsf9P41274 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfsf9P41274 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfsf9P41274 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfsf9P41274 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfsf9P41274 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.82□□□□□ -0.68
Tnfsf9P41274 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Tnfsf9P41274 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.81□□□□□ -0.68
Tnfsf9P41274 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Tnfsf9P41274 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Tnfsf9P41274 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.81□□□□□ -0.68
Tnfsf9P41274 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.81□□□□□ -0.68
Tnfsf9P41274 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Gm15528-201ENSMUST00000117821 864 ntBASIC10.81□□□□□ -0.68
Tnfsf9P41274 Gm14270-201ENSMUST00000118388 846 ntBASIC10.81□□□□□ -0.68
Tnfsf9P41274 Gm15374-201ENSMUST00000119313 844 ntBASIC10.81□□□□□ -0.68
Tnfsf9P41274 Gm15197-201ENSMUST00000120526 478 ntBASIC10.81□□□□□ -0.68
Tnfsf9P41274 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.81□□□□□ -0.68
Tnfsf9P41274 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.81□□□□□ -0.68
Tnfsf9P41274 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.81□□□□□ -0.68
Tnfsf9P41274 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC10.81□□□□□ -0.68
Tnfsf9P41274 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.81□□□□□ -0.68
Tnfsf9P41274 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Erich3-203ENSMUST00000189969 3460 ntBASIC10.81□□□□□ -0.68
Tnfsf9P41274 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.81□□□□□ -0.68
Tnfsf9P41274 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.81□□□□□ -0.68
Tnfsf9P41274 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfsf9P41274 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Gm25148-201ENSMUST00000104611 123 ntBASIC10.8□□□□□ -0.68
Tnfsf9P41274 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.8□□□□□ -0.68
Tnfsf9P41274 Gm12030-201ENSMUST00000121917 223 ntBASIC10.8□□□□□ -0.68
Tnfsf9P41274 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Mir6958-201ENSMUST00000184207 73 ntBASIC10.8□□□□□ -0.68
Tnfsf9P41274 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.8□□□□□ -0.68
Tnfsf9P41274 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms