Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Traf1P39428 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Traf1P39428 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.09□□□□□ -0.31
Traf1P39428 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Traf1P39428 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Traf1P39428 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Traf1P39428 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Traf1P39428 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.09□□□□□ -0.31
Traf1P39428 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Traf1P39428 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Traf1P39428 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Traf1P39428 Gm8111-201ENSMUST00000117659 987 ntBASIC13.09□□□□□ -0.31
Traf1P39428 Gm15374-201ENSMUST00000119313 844 ntBASIC13.09□□□□□ -0.31
Traf1P39428 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Traf1P39428 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.09□□□□□ -0.31
Traf1P39428 Gm21778-201ENSMUST00000178779 471 ntBASIC13.09□□□□□ -0.31
Traf1P39428 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.09□□□□□ -0.31
Traf1P39428 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.09□□□□□ -0.31
Traf1P39428 Mir6958-201ENSMUST00000184207 73 ntBASIC13.09□□□□□ -0.31
Traf1P39428 Gm8197-202ENSMUST00000193422 934 ntBASIC13.09□□□□□ -0.31
Traf1P39428 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Traf1P39428 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Traf1P39428 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.09□□□□□ -0.31
Traf1P39428 Gm9139-201ENSMUST00000218817 700 ntBASIC13.09□□□□□ -0.31
Traf1P39428 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Traf1P39428 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Traf1P39428 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Traf1P39428 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Traf1P39428 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Traf1P39428 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Traf1P39428 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Traf1P39428 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Traf1P39428 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Traf1P39428 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Traf1P39428 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Traf1P39428 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Traf1P39428 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Traf1P39428 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Traf1P39428 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.08□□□□□ -0.31
Traf1P39428 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.08□□□□□ -0.31
Traf1P39428 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC13.08□□□□□ -0.31
Traf1P39428 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Traf1P39428 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Traf1P39428 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Traf1P39428 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Traf1P39428 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Traf1P39428 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Traf1P39428 Gm37422-201ENSMUST00000193794 4718 ntBASIC13.08□□□□□ -0.32
Traf1P39428 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Traf1P39428 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.08□□□□□ -0.32
Traf1P39428 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Traf1P39428 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Traf1P39428 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Traf1P39428 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Traf1P39428 Gm14807-201ENSMUST00000116640 983 ntBASIC13.08□□□□□ -0.32
Traf1P39428 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.08□□□□□ -0.32
Traf1P39428 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Traf1P39428 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.08□□□□□ -0.32
Traf1P39428 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.08□□□□□ -0.32
Traf1P39428 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Traf1P39428 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Traf1P39428 Gm9135-201ENSMUST00000182963 990 ntBASIC13.08□□□□□ -0.32
Traf1P39428 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.08□□□□□ -0.32
Traf1P39428 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.08□□□□□ -0.32
Traf1P39428 Gm3726-201ENSMUST00000203110 785 ntBASIC13.08□□□□□ -0.32
Traf1P39428 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Traf1P39428 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13.08□□□□□ -0.32
Traf1P39428 Gm3619-201ENSMUST00000219947 775 ntBASIC13.08□□□□□ -0.32
Traf1P39428 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.08□□□□□ -0.32
Traf1P39428 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.08□□□□□ -0.32
Traf1P39428 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Traf1P39428 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Traf1P39428 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Traf1P39428 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Traf1P39428 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Traf1P39428 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Traf1P39428 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Traf1P39428 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Traf1P39428 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.08□□□□□ -0.32
Traf1P39428 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.08□□□□□ -0.32
Traf1P39428 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Traf1P39428 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Traf1P39428 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.07□□□□□ -0.32
Traf1P39428 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC13.07□□□□□ -0.32
Traf1P39428 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.07□□□□□ -0.32
Traf1P39428 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Traf1P39428 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms