Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm22042-201ENSMUST00000082989 165 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm26110-201ENSMUST00000083971 165 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.7□□□□□ -0.86
Slc6a1P31648 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Slc6a1P31648 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm13126-201ENSMUST00000117079 3063 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 AA474408-201ENSMUST00000098110 3339 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC9.69□□□□□ -0.86
Slc6a1P31648 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Slc6a1P31648 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Slc6a1P31648 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Slc6a1P31648 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Gm5419-201ENSMUST00000119301 527 ntBASIC9.69□□□□□ -0.86
Slc6a1P31648 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.69□□□□□ -0.86
Slc6a1P31648 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Slc6a1P31648 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Slc6a1P31648 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Gm27046-201ENSMUST00000182160 463 ntBASIC9.69□□□□□ -0.86
Slc6a1P31648 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC9.69□□□□□ -0.86
Slc6a1P31648 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Gm8176-201ENSMUST00000191297 1099 ntBASIC9.69□□□□□ -0.86
Slc6a1P31648 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC9.69□□□□□ -0.86
Slc6a1P31648 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC9.69□□□□□ -0.86
Slc6a1P31648 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Gm18212-201ENSMUST00000211678 889 ntBASIC9.69□□□□□ -0.86
Slc6a1P31648 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC9.69□□□□□ -0.86
Slc6a1P31648 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.69□□□□□ -0.86
Slc6a1P31648 AC166095.1-201ENSMUST00000223731 1241 ntBASIC9.69□□□□□ -0.86
Slc6a1P31648 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Slc6a1P31648 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Slc6a1P31648 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Slc6a1P31648 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Slc6a1P31648 Mir433-201ENSMUST00000093564 124 ntBASIC9.69□□□□□ -0.86
Slc6a1P31648 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.69□□□□□ -0.86
Slc6a1P31648 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Slc6a1P31648 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.68□□□□□ -0.86
Slc6a1P31648 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.68□□□□□ -0.86
Slc6a1P31648 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Slc6a1P31648 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Slc6a1P31648 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Slc6a1P31648 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Slc6a1P31648 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC9.68□□□□□ -0.86
Slc6a1P31648 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms