Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcam1P29533 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.93□□□□□ -0.34
Vcam1P29533 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcam1P29533 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.92□□□□□ -0.34
Vcam1P29533 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcam1P29533 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vcam1P29533 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcam1P29533 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vcam1P29533 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vcam1P29533 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcam1P29533 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vcam1P29533 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Vcam1P29533 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcam1P29533 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vcam1P29533 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Vcam1P29533 Gm11957-201ENSMUST00000118304 779 ntBASIC12.92□□□□□ -0.34
Vcam1P29533 Gm15136-201ENSMUST00000120552 533 ntBASIC12.92□□□□□ -0.34
Vcam1P29533 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC12.92□□□□□ -0.34
Vcam1P29533 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.92□□□□□ -0.34
Vcam1P29533 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.92□□□□□ -0.34
Vcam1P29533 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vcam1P29533 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vcam1P29533 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vcam1P29533 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.92□□□□□ -0.34
Vcam1P29533 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.92□□□□□ -0.34
Vcam1P29533 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.92□□□□□ -0.34
Vcam1P29533 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vcam1P29533 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcam1P29533 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.92□□□□□ -0.34
Vcam1P29533 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcam1P29533 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcam1P29533 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcam1P29533 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vcam1P29533 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vcam1P29533 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vcam1P29533 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.92□□□□□ -0.34
Vcam1P29533 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcam1P29533 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vcam1P29533 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcam1P29533 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcam1P29533 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vcam1P29533 Gm22937-201ENSMUST00000103954 131 ntBASIC12.91□□□□□ -0.34
Vcam1P29533 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Vcam1P29533 Gm12463-201ENSMUST00000118271 849 ntBASIC12.91□□□□□ -0.34
Vcam1P29533 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.91□□□□□ -0.34
Vcam1P29533 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 Gm26119-201ENSMUST00000175601 104 ntBASIC12.91□□□□□ -0.34
Vcam1P29533 Platr10-202ENSMUST00000191479 818 ntBASIC12.91□□□□□ -0.34
Vcam1P29533 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.91□□□□□ -0.34
Vcam1P29533 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.91□□□□□ -0.34
Vcam1P29533 Gm45085-201ENSMUST00000209100 441 ntBASIC12.91□□□□□ -0.34
Vcam1P29533 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.91□□□□□ -0.34
Vcam1P29533 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.91□□□□□ -0.34
Vcam1P29533 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Vcam1P29533 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.91□□□□□ -0.34
Vcam1P29533 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Vcam1P29533 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vcam1P29533 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vcam1P29533 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.91□□□□□ -0.34
Vcam1P29533 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vcam1P29533 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vcam1P29533 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Vcam1P29533 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcam1P29533 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms