Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC11.32□□□□□ -0.6
RxrbP28704 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
RxrbP28704 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC11.32□□□□□ -0.6
RxrbP28704 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Gm24255-201ENSMUST00000104481 128 ntBASIC11.32□□□□□ -0.6
RxrbP28704 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.32□□□□□ -0.6
RxrbP28704 Gm13665-201ENSMUST00000120830 528 ntBASIC11.32□□□□□ -0.6
RxrbP28704 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.32□□□□□ -0.6
RxrbP28704 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Gm26047-201ENSMUST00000157308 113 ntBASIC11.32□□□□□ -0.6
RxrbP28704 Gm25226-201ENSMUST00000158198 123 ntBASIC11.32□□□□□ -0.6
RxrbP28704 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.32□□□□□ -0.6
RxrbP28704 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RxrbP28704 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.32□□□□□ -0.6
RxrbP28704 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.32□□□□□ -0.6
RxrbP28704 Gm26047-202ENSMUST00000198840 115 ntBASIC11.32□□□□□ -0.6
RxrbP28704 Gm6334-201ENSMUST00000207083 228 ntBASIC11.32□□□□□ -0.6
RxrbP28704 Gm4157-201ENSMUST00000211647 679 ntBASIC11.32□□□□□ -0.6
RxrbP28704 Gm7940-201ENSMUST00000218195 769 ntBASIC11.32□□□□□ -0.6
RxrbP28704 Cts7-204ENSMUST00000225321 1257 ntBASIC11.32□□□□□ -0.6
RxrbP28704 Thoc7-209ENSMUST00000225325 765 ntBASIC11.32□□□□□ -0.6
RxrbP28704 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
RxrbP28704 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.32□□□□□ -0.6
RxrbP28704 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.32□□□□□ -0.6
RxrbP28704 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
RxrbP28704 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RxrbP28704 Gm44445-201ENSMUST00000204075 2683 ntBASIC11.32□□□□□ -0.6
RxrbP28704 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
RxrbP28704 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.31□□□□□ -0.6
RxrbP28704 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
RxrbP28704 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.31□□□□□ -0.6
RxrbP28704 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
RxrbP28704 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.31□□□□□ -0.6
RxrbP28704 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Gm20482-202ENSMUST00000174729 825 ntBASIC11.31□□□□□ -0.6
RxrbP28704 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.31□□□□□ -0.6
RxrbP28704 Gm4310-201ENSMUST00000177847 889 ntBASIC11.31□□□□□ -0.6
RxrbP28704 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.31□□□□□ -0.6
RxrbP28704 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.31□□□□□ -0.6
RxrbP28704 Gm38117-201ENSMUST00000194653 939 ntBASIC11.31□□□□□ -0.6
RxrbP28704 Gm38341-201ENSMUST00000195357 515 ntBASIC11.31□□□□□ -0.6
RxrbP28704 Gm38317-201ENSMUST00000195564 343 ntBASIC11.31□□□□□ -0.6
RxrbP28704 Gm9353-201ENSMUST00000200472 604 ntBASIC11.31□□□□□ -0.6
RxrbP28704 Gm42867-201ENSMUST00000202995 469 ntBASIC11.31□□□□□ -0.6
RxrbP28704 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.31□□□□□ -0.6
RxrbP28704 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
RxrbP28704 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
RxrbP28704 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
RxrbP28704 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 AC144938.1-201ENSMUST00000223994 2167 ntBASIC11.31□□□□□ -0.6
RxrbP28704 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RxrbP28704 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
RxrbP28704 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.31□□□□□ -0.6
RxrbP28704 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC11.31□□□□□ -0.6
RxrbP28704 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
RxrbP28704 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.3□□□□□ -0.6
RxrbP28704 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RxrbP28704 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.3□□□□□ -0.6
RxrbP28704 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.3□□□□□ -0.6
RxrbP28704 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.3□□□□□ -0.6
RxrbP28704 Gm7736-201ENSMUST00000096981 1527 ntBASIC11.3□□□□□ -0.6
RxrbP28704 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RxrbP28704 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.3□□□□□ -0.6
RxrbP28704 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RxrbP28704 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms