Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm4294-201ENSMUST00000105169 614 ntBASIC12.39□□□□□ -0.43
Pde6bP23440 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.39□□□□□ -0.43
Pde6bP23440 Gm15329-201ENSMUST00000121408 155 ntBASIC12.39□□□□□ -0.43
Pde6bP23440 Gm11960-201ENSMUST00000122068 925 ntBASIC12.39□□□□□ -0.43
Pde6bP23440 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.39□□□□□ -0.43
Pde6bP23440 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.39□□□□□ -0.43
Pde6bP23440 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.39□□□□□ -0.43
Pde6bP23440 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.39□□□□□ -0.43
Pde6bP23440 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.39□□□□□ -0.43
Pde6bP23440 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.39□□□□□ -0.43
Pde6bP23440 Gm37284-201ENSMUST00000193607 539 ntBASIC12.39□□□□□ -0.43
Pde6bP23440 Gm42660-201ENSMUST00000197733 947 ntBASIC12.39□□□□□ -0.43
Pde6bP23440 Gm17825-201ENSMUST00000206836 794 ntBASIC12.39□□□□□ -0.43
Pde6bP23440 Gm18059-201ENSMUST00000208073 580 ntBASIC12.39□□□□□ -0.43
Pde6bP23440 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.39□□□□□ -0.43
Pde6bP23440 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.39□□□□□ -0.43
Pde6bP23440 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.39□□□□□ -0.43
Pde6bP23440 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Gm25201-201ENSMUST00000083093 170 ntBASIC12.39□□□□□ -0.43
Pde6bP23440 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pde6bP23440 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.39□□□□□ -0.43
Pde6bP23440 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.39□□□□□ -0.43
Pde6bP23440 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pde6bP23440 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.39□□□□□ -0.43
Pde6bP23440 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.38□□□□□ -0.43
Pde6bP23440 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.38□□□□□ -0.43
Pde6bP23440 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pde6bP23440 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.38□□□□□ -0.43
Pde6bP23440 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.38□□□□□ -0.43
Pde6bP23440 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.38□□□□□ -0.43
Pde6bP23440 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pde6bP23440 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.38□□□□□ -0.43
Pde6bP23440 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pde6bP23440 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pde6bP23440 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.38□□□□□ -0.43
Pde6bP23440 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
Pde6bP23440 Gm11801-201ENSMUST00000117807 746 ntBASIC12.38□□□□□ -0.43
Pde6bP23440 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.38□□□□□ -0.43
Pde6bP23440 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pde6bP23440 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.38□□□□□ -0.43
Pde6bP23440 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.38□□□□□ -0.43
Pde6bP23440 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pde6bP23440 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pde6bP23440 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pde6bP23440 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.38□□□□□ -0.43
Pde6bP23440 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pde6bP23440 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pde6bP23440 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.38□□□□□ -0.43
Pde6bP23440 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.38□□□□□ -0.43
Pde6bP23440 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.38□□□□□ -0.43
Pde6bP23440 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6bP23440 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Pde6bP23440 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Pde6bP23440 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.37□□□□□ -0.43
Pde6bP23440 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pde6bP23440 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms