Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Fv4P11370 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Fv4P11370 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Gm14193-201ENSMUST00000105067 153 ntBASIC10.88□□□□□ -0.67
Fv4P11370 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.88□□□□□ -0.67
Fv4P11370 Gm22711-201ENSMUST00000116890 133 ntBASIC10.88□□□□□ -0.67
Fv4P11370 Gm11941-201ENSMUST00000119904 610 ntBASIC10.88□□□□□ -0.67
Fv4P11370 Gm11573-201ENSMUST00000119956 394 ntBASIC10.88□□□□□ -0.67
Fv4P11370 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.88□□□□□ -0.67
Fv4P11370 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.88□□□□□ -0.67
Fv4P11370 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.88□□□□□ -0.67
Fv4P11370 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Fv4P11370 Gm24074-201ENSMUST00000158178 260 ntBASIC10.88□□□□□ -0.67
Fv4P11370 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.88□□□□□ -0.67
Fv4P11370 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Fv4P11370 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Gm43058-201ENSMUST00000197645 625 ntBASIC10.88□□□□□ -0.67
Fv4P11370 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.88□□□□□ -0.67
Fv4P11370 Gm6905-201ENSMUST00000205729 511 ntBASIC10.88□□□□□ -0.67
Fv4P11370 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Gm5369-201ENSMUST00000217499 588 ntBASIC10.88□□□□□ -0.67
Fv4P11370 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.88□□□□□ -0.67
Fv4P11370 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Fv4P11370 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.88□□□□□ -0.67
Fv4P11370 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Fv4P11370 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.88□□□□□ -0.67
Fv4P11370 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.88□□□□□ -0.67
Fv4P11370 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.88□□□□□ -0.67
Fv4P11370 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Fv4P11370 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Fv4P11370 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.88□□□□□ -0.67
Fv4P11370 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.88□□□□□ -0.67
Fv4P11370 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fv4P11370 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Fv4P11370 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Fv4P11370 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fv4P11370 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.87□□□□□ -0.67
Fv4P11370 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Fv4P11370 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Fv4P11370 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.87□□□□□ -0.67
Fv4P11370 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fv4P11370 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Fv4P11370 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Fv4P11370 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.87□□□□□ -0.67
Fv4P11370 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Fv4P11370 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Fv4P11370 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fv4P11370 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fv4P11370 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fv4P11370 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Fv4P11370 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fv4P11370 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Fv4P11370 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Fv4P11370 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.87□□□□□ -0.67
Fv4P11370 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fv4P11370 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.87□□□□□ -0.67
Fv4P11370 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.87□□□□□ -0.67
Fv4P11370 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Fv4P11370 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.87□□□□□ -0.67
Fv4P11370 Mir6420-201ENSMUST00000185032 102 ntBASIC10.87□□□□□ -0.67
Fv4P11370 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.87□□□□□ -0.67
Fv4P11370 Gm5302-201ENSMUST00000202130 796 ntBASIC10.87□□□□□ -0.67
Fv4P11370 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.87□□□□□ -0.67
Fv4P11370 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.87□□□□□ -0.67
Fv4P11370 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.87□□□□□ -0.67
Fv4P11370 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.87□□□□□ -0.67
Fv4P11370 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.87□□□□□ -0.67
Fv4P11370 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fv4P11370 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fv4P11370 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fv4P11370 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fv4P11370 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.87□□□□□ -0.67
Fv4P11370 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fv4P11370 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fv4P11370 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fv4P11370 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fv4P11370 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Fv4P11370 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms