Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl3P10855 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl3P10855 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl3P10855 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC9.96□□□□□ -0.82
Ccl3P10855 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.82
Ccl3P10855 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Ccl3P10855 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.95□□□□□ -0.82
Ccl3P10855 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Ccl3P10855 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Ccl3P10855 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Ccl3P10855 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Ccl3P10855 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ccl3P10855 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ccl3P10855 Snord17-201ENSMUST00000104526 238 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Ccl3P10855 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Gm14113-201ENSMUST00000121399 976 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Gm23647-201ENSMUST00000175042 109 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Rn5s-201ENSMUST00000177555 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s108-201ENSMUST00000177575 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s121-201ENSMUST00000177589 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s146-201ENSMUST00000177889 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Gm22109-201ENSMUST00000177995 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Gm22291-201ENSMUST00000178027 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s141-201ENSMUST00000178066 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Gm23284-201ENSMUST00000178069 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s100-201ENSMUST00000178106 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s111-201ENSMUST00000178203 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s105-201ENSMUST00000178499 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s149-201ENSMUST00000178520 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s103-201ENSMUST00000178755 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s123-201ENSMUST00000178804 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s142-201ENSMUST00000178820 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s144-201ENSMUST00000178859 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s139-201ENSMUST00000178975 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s134-201ENSMUST00000178983 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s136-201ENSMUST00000179080 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Gm25018-201ENSMUST00000179081 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s104-201ENSMUST00000179107 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s113-201ENSMUST00000179143 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s133-201ENSMUST00000179275 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s117-201ENSMUST00000179431 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Gm25212-201ENSMUST00000179432 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s138-201ENSMUST00000179476 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s122-201ENSMUST00000179500 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s143-201ENSMUST00000179542 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s107-201ENSMUST00000179704 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Gm26391-201ENSMUST00000179843 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s110-201ENSMUST00000179995 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s128-201ENSMUST00000180096 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 n-R5s124-201ENSMUST00000180334 119 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Gm27440-201ENSMUST00000184785 107 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Ccl3P10855 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Ccl3P10855 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Ccl3P10855 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC9.95□□□□□ -0.82
Ccl3P10855 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC9.95□□□□□ -0.82
Ccl3P10855 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.95□□□□□ -0.82
Ccl3P10855 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC9.95□□□□□ -0.82
Ccl3P10855 AC134601.2-201ENSMUST00000221071 130 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Gm24089-201ENSMUST00000093696 109 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Ccl3P10855 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC9.95□□□□□ -0.82
Ccl3P10855 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.95□□□□□ -0.82
Ccl3P10855 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.95□□□□□ -0.82
Ccl3P10855 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Ccl3P10855 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Ccl3P10855 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.95□□□□□ -0.82
Ccl3P10855 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.95□□□□□ -0.82
Ccl3P10855 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC9.95□□□□□ -0.82
Ccl3P10855 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ccl3P10855 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl3P10855 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl3P10855 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl3P10855 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl3P10855 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl3P10855 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl3P10855 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms