Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01852 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01852 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01852 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
P01852 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P01852 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
P01852 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
P01852 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01852 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01852 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01852 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01852 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
P01852 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.34□□□□□ -0.75
P01852 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
P01852 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.34□□□□□ -0.75
P01852 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P01852 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
P01852 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
P01852 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
P01852 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.34□□□□□ -0.75
P01852 Gm23272-201ENSMUST00000104053 129 ntBASIC10.34□□□□□ -0.75
P01852 Gm4294-201ENSMUST00000105169 614 ntBASIC10.34□□□□□ -0.75
P01852 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P01852 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Gm15549-201ENSMUST00000121595 622 ntBASIC10.34□□□□□ -0.75
P01852 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.34□□□□□ -0.75
P01852 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.34□□□□□ -0.75
P01852 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.34□□□□□ -0.75
P01852 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.34□□□□□ -0.75
P01852 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.34□□□□□ -0.75
P01852 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.34□□□□□ -0.75
P01852 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.34□□□□□ -0.75
P01852 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.34□□□□□ -0.75
P01852 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.34□□□□□ -0.75
P01852 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
P01852 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
P01852 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
P01852 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.34□□□□□ -0.75
P01852 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P01852 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.34□□□□□ -0.75
P01852 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P01852 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.34□□□□□ -0.75
P01852 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
P01852 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.34□□□□□ -0.75
P01852 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.34□□□□□ -0.75
P01852 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01852 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.33□□□□□ -0.75
P01852 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.33□□□□□ -0.76
P01852 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.33□□□□□ -0.76
P01852 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.33□□□□□ -0.76
P01852 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.33□□□□□ -0.76
P01852 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.33□□□□□ -0.76
P01852 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 Gm12029-201ENSMUST00000120073 832 ntBASIC10.33□□□□□ -0.76
P01852 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.33□□□□□ -0.76
P01852 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P01852 Gm23771-201ENSMUST00000178702 110 ntBASIC10.33□□□□□ -0.76
P01852 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms