Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Col4a6B1AVK5 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC11.4□□□□□ -0.59
Col4a6B1AVK5 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Col4a6B1AVK5 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC11.4□□□□□ -0.59
Col4a6B1AVK5 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC11.4□□□□□ -0.59
Col4a6B1AVK5 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col4a6B1AVK5 Gm22994-201ENSMUST00000175422 82 ntBASIC11.4□□□□□ -0.59
Col4a6B1AVK5 Gm4705-201ENSMUST00000177415 354 ntBASIC11.4□□□□□ -0.59
Col4a6B1AVK5 Gm38313-201ENSMUST00000191953 1266 ntBASIC11.4□□□□□ -0.59
Col4a6B1AVK5 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.59
Col4a6B1AVK5 Gm9515-201ENSMUST00000200276 647 ntBASIC11.4□□□□□ -0.59
Col4a6B1AVK5 Gm45090-201ENSMUST00000208775 1148 ntBASIC11.4□□□□□ -0.59
Col4a6B1AVK5 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC11.4□□□□□ -0.59
Col4a6B1AVK5 AC163638.2-201ENSMUST00000224920 827 ntBASIC11.4□□□□□ -0.59
Col4a6B1AVK5 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Col4a6B1AVK5 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Gm8725-201ENSMUST00000221829 1333 ntBASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Gm5801-201ENSMUST00000182247 780 ntBASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Gm44236-201ENSMUST00000204492 513 ntBASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Gm18122-201ENSMUST00000211390 904 ntBASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Gm9701-201ENSMUST00000077976 427 ntBASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 AC154197.1-201ENSMUST00000225136 1382 ntBASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Col4a6B1AVK5 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Gm20091-201ENSMUST00000179683 189 ntBASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Gm43866-201ENSMUST00000203894 839 ntBASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Atf7-201ENSMUST00000096143 390 ntBASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Gm10581-201ENSMUST00000097986 231 ntBASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col4a6B1AVK5 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Gm13426-201ENSMUST00000117887 795 ntBASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Gm12684-201ENSMUST00000118675 999 ntBASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Gm14997-201ENSMUST00000119232 636 ntBASIC11.37□□□□□ -0.59
Col4a6B1AVK5 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 AC161172.1-201ENSMUST00000227801 486 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms