Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Gm8111-201ENSMUST00000117659 987 ntBASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Gm18367-201ENSMUST00000176139 600 ntBASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Snord17-201ENSMUST00000104526 238 ntBASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Gm15352-201ENSMUST00000118696 270 ntBASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Gm37284-201ENSMUST00000193607 539 ntBASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Gm37981-201ENSMUST00000194280 535 ntBASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Gm43058-201ENSMUST00000197645 625 ntBASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Gm43186-201ENSMUST00000198130 824 ntBASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn9Q9Z0S7 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms