Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Gm6124-201ENSMUST00000188240 2580 ntBASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Gm15615-201ENSMUST00000118876 198 ntBASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Gm15374-201ENSMUST00000119313 844 ntBASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Ighv5-11-201ENSMUST00000193354 371 ntBASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Gm37981-201ENSMUST00000194280 535 ntBASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Gm36957-201ENSMUST00000192982 2824 ntBASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Gm44153-201ENSMUST00000204162 1580 ntBASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC14.25□□□□□ -0.13
Chmp4bQ9D8B3 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Gm9915-201ENSMUST00000066196 1383 ntBASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 n-R5s64-201ENSMUST00000102019 119 ntBASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Gm9062-201ENSMUST00000117712 727 ntBASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Gm8876-201ENSMUST00000120768 1122 ntBASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Mrip-ps-201ENSMUST00000184613 940 ntBASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Gm18539-201ENSMUST00000204745 1090 ntBASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 CT030170.2-201ENSMUST00000223267 126 ntBASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 AC159002.1-201ENSMUST00000226714 924 ntBASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4bQ9D8B3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Gm25148-201ENSMUST00000104611 123 ntBASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Gm12165-201ENSMUST00000117047 342 ntBASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Gm24074-201ENSMUST00000158178 260 ntBASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Gm23699-201ENSMUST00000158835 135 ntBASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Gm17825-201ENSMUST00000206836 794 ntBASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4bQ9D8B3 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms