Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm45758-201ENSMUST00000212448 1006 ntBASIC14.83□□□□□ -0.04
U2af1Q9D883 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC14.83□□□□□ -0.04
U2af1Q9D883 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.83□□□□□ -0.04
U2af1Q9D883 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
U2af1Q9D883 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
U2af1Q9D883 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
U2af1Q9D883 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
U2af1Q9D883 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
U2af1Q9D883 AC109214.1-201ENSMUST00000219520 1372 ntBASIC14.83□□□□□ -0.04
U2af1Q9D883 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.83□□□□□ -0.04
U2af1Q9D883 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
U2af1Q9D883 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
U2af1Q9D883 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
U2af1Q9D883 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
U2af1Q9D883 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
U2af1Q9D883 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
U2af1Q9D883 Gm37651-201ENSMUST00000194679 1494 ntBASIC14.82□□□□□ -0.04
U2af1Q9D883 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
U2af1Q9D883 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC14.82□□□□□ -0.04
U2af1Q9D883 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC14.82□□□□□ -0.04
U2af1Q9D883 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC14.82□□□□□ -0.04
U2af1Q9D883 Gm4895-201ENSMUST00000181646 1137 ntBASIC14.82□□□□□ -0.04
U2af1Q9D883 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Gm45592-201ENSMUST00000209605 1043 ntBASIC14.82□□□□□ -0.04
U2af1Q9D883 AC134248.1-201ENSMUST00000216113 1176 ntBASIC14.82□□□□□ -0.04
U2af1Q9D883 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC14.82□□□□□ -0.04
U2af1Q9D883 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
U2af1Q9D883 Gm9139-201ENSMUST00000218817 700 ntBASIC14.82□□□□□ -0.04
U2af1Q9D883 CT009536.2-201ENSMUST00000225370 665 ntBASIC14.82□□□□□ -0.04
U2af1Q9D883 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.82□□□□□ -0.04
U2af1Q9D883 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC14.82□□□□□ -0.04
U2af1Q9D883 Gm37969-201ENSMUST00000195777 3409 ntBASIC14.82□□□□□ -0.04
U2af1Q9D883 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC14.82□□□□□ -0.04
U2af1Q9D883 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
U2af1Q9D883 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
U2af1Q9D883 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
U2af1Q9D883 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC14.81□□□□□ -0.04
U2af1Q9D883 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
U2af1Q9D883 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
U2af1Q9D883 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
U2af1Q9D883 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC14.81□□□□□ -0.04
U2af1Q9D883 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
U2af1Q9D883 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
U2af1Q9D883 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC14.81□□□□□ -0.04
U2af1Q9D883 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC14.81□□□□□ -0.04
U2af1Q9D883 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.81□□□□□ -0.04
U2af1Q9D883 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC14.81□□□□□ -0.04
U2af1Q9D883 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
U2af1Q9D883 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
U2af1Q9D883 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
U2af1Q9D883 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC14.81□□□□□ -0.04
U2af1Q9D883 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
U2af1Q9D883 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
U2af1Q9D883 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
U2af1Q9D883 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
U2af1Q9D883 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
U2af1Q9D883 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
U2af1Q9D883 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
U2af1Q9D883 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
U2af1Q9D883 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
U2af1Q9D883 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
U2af1Q9D883 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
U2af1Q9D883 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
U2af1Q9D883 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
U2af1Q9D883 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
U2af1Q9D883 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
U2af1Q9D883 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
U2af1Q9D883 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
U2af1Q9D883 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
U2af1Q9D883 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
U2af1Q9D883 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.8□□□□□ -0.04
U2af1Q9D883 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
U2af1Q9D883 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
U2af1Q9D883 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
U2af1Q9D883 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
U2af1Q9D883 Gm25063-201ENSMUST00000104666 94 ntBASIC14.8□□□□□ -0.04
U2af1Q9D883 Gm13284-201ENSMUST00000121020 547 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms