Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Gm42941-201ENSMUST00000200347 1321 ntBASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chaf1bQ9D0N7 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Gm11930-201ENSMUST00000117788 190 ntBASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Gm43636-201ENSMUST00000201501 2235 ntBASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.57□□□□□ -0.72
Chaf1bQ9D0N7 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Gm14109-201ENSMUST00000118814 309 ntBASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Gm4310-201ENSMUST00000177847 889 ntBASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.56□□□□□ -0.72
Chaf1bQ9D0N7 Gm18935-201ENSMUST00000212692 664 ntBASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms