Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Gm12196-201ENSMUST00000120954 262 ntBASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Gm10807-201ENSMUST00000177134 795 ntBASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.77□□□□□ -0.53
Rnf135Q9CWS1 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Gm14724-201ENSMUST00000118400 537 ntBASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Gm12029-201ENSMUST00000120073 832 ntBASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Gm37246-201ENSMUST00000192665 835 ntBASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Gm45219-201ENSMUST00000205602 465 ntBASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf135Q9CWS1 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Gm12579-201ENSMUST00000118040 783 ntBASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Gm43916-201ENSMUST00000205062 967 ntBASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Rnf135Q9CWS1 Gm6722-201ENSMUST00000221586 390 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms