Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Mir6546-201ENSMUST00000184460 62 ntBASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Gm37284-201ENSMUST00000193607 539 ntBASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Gm44100-201ENSMUST00000204329 436 ntBASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rpa3Q9CQ71 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Gm11949-201ENSMUST00000117640 372 ntBASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Gm15881-201ENSMUST00000148792 942 ntBASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Gm18753-201ENSMUST00000201000 566 ntBASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Gm44315-201ENSMUST00000203041 219 ntBASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Gm5451-201ENSMUST00000080545 579 ntBASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rpa3Q9CQ71 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Gm8111-201ENSMUST00000117659 987 ntBASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Gm16219-201ENSMUST00000120096 274 ntBASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Gm9211-201ENSMUST00000182882 975 ntBASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Gm18827-201ENSMUST00000188341 790 ntBASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Gm42867-201ENSMUST00000202995 469 ntBASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Gm9132-201ENSMUST00000210182 832 ntBASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpa3Q9CQ71 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms