Protein–RNA interactions for Protein: Q9CPX6

Atg3, Ubiquitin-like-conjugating enzyme ATG3, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg3Q9CPX6 n-R5s105-201ENSMUST00000178499 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s149-201ENSMUST00000178520 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s103-201ENSMUST00000178755 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s123-201ENSMUST00000178804 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s142-201ENSMUST00000178820 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s144-201ENSMUST00000178859 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s139-201ENSMUST00000178975 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s134-201ENSMUST00000178983 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s136-201ENSMUST00000179080 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Gm25018-201ENSMUST00000179081 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s104-201ENSMUST00000179107 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s113-201ENSMUST00000179143 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s133-201ENSMUST00000179275 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s117-201ENSMUST00000179431 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Gm25212-201ENSMUST00000179432 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s138-201ENSMUST00000179476 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s122-201ENSMUST00000179500 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s143-201ENSMUST00000179542 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s107-201ENSMUST00000179704 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Gm26391-201ENSMUST00000179843 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s110-201ENSMUST00000179995 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s128-201ENSMUST00000180096 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 n-R5s124-201ENSMUST00000180334 119 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Gm43854-201ENSMUST00000200418 394 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Gm7939-201ENSMUST00000201233 1050 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 BC080696-201ENSMUST00000202858 1218 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Gm24089-201ENSMUST00000093696 109 ntBASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg3Q9CPX6 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Gm11475-201ENSMUST00000118482 476 ntBASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Gm13204-201ENSMUST00000120110 821 ntBASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Gm11952-201ENSMUST00000121172 821 ntBASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Gm27956-201ENSMUST00000175604 260 ntBASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 AC129975.1-201ENSMUST00000224816 592 ntBASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Gm45776-201ENSMUST00000212366 1522 ntBASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Gm43152-201ENSMUST00000202495 1638 ntBASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Atg3Q9CPX6 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Gm23745-201ENSMUST00000104230 125 ntBASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Gm14398-201ENSMUST00000117287 1073 ntBASIC14.28□□□□□ -0.12
Atg3Q9CPX6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Atg3Q9CPX6 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms