Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Gm7848-201ENSMUST00000210739 718 ntBASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim11Q99PQ2 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Gm22920-201ENSMUST00000102175 109 ntBASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Gm43438-201ENSMUST00000198133 379 ntBASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Gm17825-201ENSMUST00000206836 794 ntBASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim11Q99PQ2 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms